How Co-translational Folding of Multi-domain Protein Is Affected by Elongation Schedule: Molecular Simulations
Fig 4
SufI folding networks for refolding (A) and for the codon-based CTF (B).
The refolding network possesses 3284 nodes, while the codon-based CTF has only 820 nodes. The size of nodes represent their probabilities. The darkness of the node represents native-ness. The darker one is closer to the native. Diamonds, triangle, and stars indicate that N-, M-, and C-domains are pre-dominantly unfolded, respectively. When pre-dominantly unfolded domains are no uniquely decided, circles are used.