Structure-Based Alignment and Consensus Secondary Structures for Three HIV-Related RNA Genomes
Fig 7
Consensus structures for the cPPT and PPT elements.
(A) cPPT and PPT sequences and SHAPE reactivities. The six sequences correspond to two elements from each of three genomes. Regions with consistently low or high SHAPE reactivities are highlighted by shading. (B) Structure models for cPPT- and PPT-containing elements in the final HIV-1 model.