Structure-Based Alignment and Consensus Secondary Structures for Three HIV-Related RNA Genomes
Fig 6
Novel conserved, likely functional, elements in the final HIV-1 structure model.
(A) Structural elements located near protein-protein junctions. Protein domain junctions are labeled. (B) Conserved structural elements with the potential to form long (>20 bp) helical stacks. (C) Conserved structure at the A1 splice site, described in Pollom et al., recapitulated in this work [11].