Protein-Protein Docking with Dynamic Residue Protonation States
Figure 3
Summary of pHDock performance.
Correlation plot comparing discrimination scores of pHDock and RosettaDock docking predictions for each target in the complete benchmark dataset. Complexes docked at acidic pH (pH≤7.0) and basic pH (pH>7.0) are represented as circles and squares, respectively. The discrimination score cutoffs for a successful prediction (D<0) are marked using broken lines. Corner numbers indicate the total predictions in each plot section (edges defined by the broken lines and the solid line at 45°).