Integrative Multi-omics Module Network Inference with Lemon-Tree
Fig 2
Comparison between Lemon-Tree and CONEXIC.
Gene Ontology (GO) enrichment of the co-expressed gene clusters, indicated by counting the number of GO categories having a lower p-value (A) and by comparing the sum of the quantity -log10(p-value) (B) for different global p-value cutoff levels (x-axis). (C) Relative enrichment of inferred interactions by Lemon-Tree and CONEXIC to known molecular protein-protein interactions (PPI), for increasing interaction distances.