Communication Routes in ARID Domains between Distal Residues in Helix 5 and the DNA-Binding Loops
Figure 9
Paths of long-range communication mediated by Q111 in wt, Q111A and Q111N ARID3A.
The shortest paths of communications mediated by Q111 in ARID3AFREE, (left panel) ARID3AQ111A (middle panel) and ARID3AQ111N (right panel) simulations as identified by the PSN-LMI approach are shown as cylinders of thickness proportional to the probability of occurrence. The Q111 Cα and the L64 Cα are also indicated by orange and yellow spheres, respectively. L1 and L2 are highlighted in yellow.