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tRNA Signatures Reveal a Polyphyletic Origin of SAR11 Strains among Alphaproteobacteria

Figure 7

Base compositions of alphaproteobacterial tRNAs showing convergence between Rickettsiales and SAR11.

A. Stacked bar graphs of tRNA base compositions by clade. B. UPGMA clustering of clades based on Euclidean distances of tRNA base compositions under the centered log ratio transformation [88]. tRNA base compositions alone are sufficient to group all SAR11 strains together with Rickettsiales as a clade. Most popular molecular evolutionary models in use today do not account for base content variation as a source of bias in phylogenetic estimation. Complete source code and data to reproduce these results are in Dataset S6.

Figure 7

doi: https://doi.org/10.1371/journal.pcbi.1003454.g007