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Fast Reconstruction of Compact Context-Specific Metabolic Network Models

Figure 3

Comparing fastcore to an exact MILP solver on a small E. coli model [38].

Shown are mean values of sizes of reconstructed models (over 50 repetitions for each core set; standard deviations were small and are omitted to avoid clutter) as a function of the size of the core set. fastcore computes near-optimal reconstructions, which improve with the size of the core set.

Figure 3

doi: https://doi.org/10.1371/journal.pcbi.1003424.g003