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Comparing Algorithms That Reconstruct Cell Lineage Trees Utilizing Information on Microsatellite Mutations

Figure 5

Performance summary of all the methods for datasets composed of cells of same depth only.

Each column presents a different clustering measure (see Materials and Methods for details), and each bar represents a different distance measure, where the colors specify the distance measures as noted in the legend. The first group of bars (from left to right) presents the results using the NJ algorithm, the second group of bars presents the results using the QMC algorithm, the third presents the results using the UPGMA algorithm, and the last one presents the results using the BATWING tool. Rows description: (A) The average score of all the methods, where higher values (that are transformations of the real scores) indicate better performance. (B) The number of times every method received the highest rank (in this case it is 31 since we compared 31 methods).

Figure 5

doi: https://doi.org/10.1371/journal.pcbi.1003297.g005