Sensitive Detection of Viral Transcripts in Human Tumor Transcriptomes
Figure 10
Reconstruction of novel transcripts by de-novo assembly.
Histograms display lengths of reconstructed sequence contigs assembled from unmapped reads of NB2 stage 4 and stage 4S samples (y-axis in log-space). Two independent assembly methods, Trinity and Oases, were used in the reconstruction. The grand total number of contigs reconstructed within each assembly is displayed in the rightmost column. Reconstructed contigs are annotated with their putative taxonomic origin as inferred by comparison with NCBI nucleotide (nt) and protein (nr) archives using TBLASTX database searches.