A Model for the Self-Organization of Vesicular Flux and Protein Distributions in the Golgi Apparatus
Figure 3
Self-generated steady state distributions of alpha and beta SNAREs and enzymes as it is observed in the Golgi apparatus.
Panel A: t-SNARE (solid line) and v-SNARE (circles) coinciding with t-SNARE, and
t-SNARE (dashed line) and v-SNARE (dotted line) vs. the cisternal number
. Panel B: cis (solid line), medial (dashed line) and trans (dotted line) Golgi enzymes normalized by their maximum value vs number of cisterna
. The parameters are: Decay rates
are zero for all substances except for
t-SNARE for which
, the vesicular transport coefficient
, and dissociation constants for vesicular binding are
for ER v-SNARE,
for cis t- and v-SNAREs,
for trans t-SNARE,
for trans v-SNARE,
for cis enzymes,
for median enzymes, and
for trans enzymes. Initial concentrations of all substances in the first cisterna are
, and the concentration of t-SNARE in ER is 0.7.