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Functional Analysis of Metabolic Channeling and Regulation in Lignin Biosynthesis: A Computational Approach

Figure 3

Lists of topological configurations and regulatory mechanisms.

Panel A: The topological configurations differ in their numbers of edges. Panel B: The orange arrows represent activation processes, whereas the blocked lines (aqua) represent inhibition processes. Arrows colored in gray are reactions included in only some specific topological configurations. Metabolite names: 1 caffeoyl CoA; , caffeyl aldehyde; feruloyl CoA; coniferyl aldehyde; coniferyl alcohol; 5-hydroxyconiferyl aldehyde.

Figure 3

doi: https://doi.org/10.1371/journal.pcbi.1002769.g003