Quality of Computationally Inferred Gene Ontology Annotations
Figure 6
The quality of the 16-01-2008 UniProt-GOA release, evaluated by the 11-01-2011 UniProt-GOA release.
Each reference code is evaluated separately: (A) Inferred from Enzyme Commission, (B) Inferred from UniProt Subcellular Location terms, (C) Inferred from UniProtKB keywords, (D) Inferred from Ensembl Compara, (E) Inferred from HAMAP2GO, and (F) Inferred from InterPro. The 12 model organisms included in the analysis are Homo sapiens, Mus musculus, Rattus norvegicus, Caenorhabditis elegans, Drosophila melanogaster, Arabidopsis thaliana, Gallus gallus, Danio rerio, Dictyostelium discoideum, Saccharomyces cerevisiae, Schizosaccharomyces pombe, and Escherichia coli K-12. The ontology is denoted by the color of the disc, while the area of the disc reflects the frequency of the GO term in the 16-01-2008 UniProt-GOA release. The colored lines correspond to the mean values for the respective axes. To be visualized in this plot, a GO term needs to have assigned at least 10 electronic annotations in the 16-01-2008 UniProt-GOA release and at least 10 experimental annotations in the 11-01-2011 UniProt-GOA release.