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Generative Embedding for Model-Based Classification of fMRI Data

Figure 3

Dynamic causal model of speech processing.

The diagram illustrates the specific dynamic causal model (DCM) that was used for the illustrative application of generative embedding in this study. It consists of 6 regions (circles), 15 interregional connections (straight arrows between regions), 6 self-connections (circular arrows), and 2 stimulus inputs (straight arrows at the bottom). The specific set of connections shown here is the result of Bayesian model selection that was carried out on the basis of a large set of competing connectivity layouts (for details, see Schofield et al., in preparation). A sparse set of 9 out of 23 connectivity and input parameters (see Figure 10) was found to be sufficiently informative to distinguish between aphasic patients and healthy controls with near-perfect accuracy (see Figure 5). The connections corresponding to these 9 parameters are highlighted in red. Only three parameters were selected in all cross-validation folds and are thus particularly meaningful for classification (bold red arrows); these refer to connections mediating information transfer from the right to the left hemisphere, converging on left PT, which is a key structure in speech processing.

Figure 3

doi: https://doi.org/10.1371/journal.pcbi.1002079.g003