Learning a Weighted Sequence Model of the Nucleosome Core and Linker Yields More Accurate Predictions in Saccharomyces cerevisiae and Homo sapiens

doi:10.1371/journal.pcbi.1000834

Learning a Weighted Sequence Model of the Nucleosome Core and Linker Yields More Accurate Predictions in Saccharomyces cerevisiae and Homo sapiens

Figure 6

Cross-validated classification performance on H. sapiens and S. cerevisiae datasets.

The H. sapiens all dataset contains dyad positions, and the S. cerevisiae all dataset contains positions. In all cases, the set of negative examples is twice as large as the set of positive examples, and the negative positions are 110 bp away from the dyads. The area under the ROC curves for H. sapiens are 0.93, 0.91, and 0.89. The area under the ROC curves from S. cerevisiae are 0.91, 0.89, 0.85, and 0.74.

doi: https://doi.org/10.1371/journal.pcbi.1000834.g006