Learning a Weighted Sequence Model of the Nucleosome Core and Linker Yields More Accurate Predictions in Saccharomyces cerevisiae and Homo sapiens

doi:10.1371/journal.pcbi.1000834

Learning a Weighted Sequence Model of the Nucleosome Core and Linker Yields More Accurate Predictions in Saccharomyces cerevisiae and Homo sapiens

Figure 4

Dinucleotide A/T and G/C patterns.

These figures show the frequency of dinucleotides composed exclusively of A/T (red) and G/C (blue). The H. sapiens patterns show no evidence of bp periodicity, while the S. cerevisiae patterns do, with peaks in the A/T pattern at 13, 24, 36, 47, 58, and 68, and peaks in the C/G pattern at 0, 20, 32, 42, 50, 61, and 72 bp from the dyad. The larger-scale trends of increasing GC-content and decreasing AT-content near the dyad are, however, similar between the two species.

doi: https://doi.org/10.1371/journal.pcbi.1000834.g004