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Combining Structure and Sequence Information Allows Automated Prediction of Substrate Specificities within Enzyme Families

Figure 2

View on the superimposed active sites of IPMDH and ICDH.

The first chain of the homo-dimeric enzyme is represented by its solvent-excluded surface. The second chain is depicted in a backbone representation. The two substrates isocitrate (purple) and isopropylmalate (green) lie in the interface of the two chains. IPMDH sidechains are coloured green and sidechains from ICDH (PDB-Id: 1AI2, [40]) are coloured purple. This figure was created using BALLView [41].

Figure 2

doi: https://doi.org/10.1371/journal.pcbi.1000636.g002