Thermodynamic Selection of Steric Zipper Patterns in the Amyloid Cross-β Spine
Figure 6
Integrity of β-sheet bilayer patterns during the production run.
(A) Distance between β-sheets in a bilayer. (B) RMSD of Cα atoms from the first snapshot. Within the simulation time, no filament except for FBA2 dissociated. The distance between β-sheets was defined by the distance between the least-squares-fit plane spanned by Cα atoms in one layer and the center of mass of Cα atoms in the other layer.