Exploring the Free Energy Landscape: From Dynamics to Networks and Back
Figure 2
Hierarchies of the basins detected for the funnel-like potential.
(A) Free Energy hierarchy: based on the relative free-energy of the nodes. (B) Temporal hierarchy: number of basins defined by SSD for the different networks built by Eq. (7). The original basins merge in function of time. Both hierarchies reveals a coarse-grained behavior of two macro-states: and
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