FINDSITELHM: A Threading-Based Approach to Ligand Homology Modeling
Figure 12
Ligand binding pose prediction for glutathione S-transferase (PDB-ID: 1a0f).
Predicted poses (thick sticks) from FINDSITELHM (superimposed ligand with the anchor portion colored in white and minimized conformation), AutoDock, LIGIN, Q-Dock and a randomly placed ligand are compared to the experimental binding pose (thin sticks). RMSD values were calculated for heavy atoms.