Cross-Over between Discrete and Continuous Protein Structure Space: Insights into Automatic Classification and Networks of Protein Structures
Figure 7
Examples of fold unifications.
(A) Domain 1o4wa_ from SCOP fold PIN domain-like and domain 1jmva_ from fold Adenine Nucleotide alpha Hydrolase-like. They have a nearly identical description in the SCOP database in terms of secondary structure elements. (B) The 7-stranded barrel with code 1m65a_ is unified to a cluster with 12 TIM barrel, one representative of which, with code 1j6oa_, is shown for comparison. (C) Unification of two domains from the SCOP folds STAT-like (PDB 1lvfa) and spectrin repeat-like (PDB 2e2aa).