In Silico Detection of Sequence Variations Modifying Transcriptional Regulation

Figure 7

Overview of the RAVEN Web Interface

(A) The search page.

(B) The search results page where a list of genes corresponding to the search query is displayed.

(C) The reference sequence selection page where the genomic location of the selected human sequence and cDNAs that map to it is displayed.

(D) The graphical results view.

(E) Table view of SNPs predicted to affect TFBSs.

(F) Selection of TFBS profiles from the JASPAR database. (G) Upload of private SNP sequences.