An Evolutionary-Network Model Reveals Stratified Interactions in the V3 Loop of the HIV-1 Envelope
Figure 3
The Consensus Network of V3 Residues
Each node corresponds to a residue in the V3 loop, numbered according to their position in the consensus sequence (identical to Korber et al. [19]) and labeled with the consensus amino acid. Dark-shaded nodes indicate residues that are connected by edges with parametric bootstrap support values exceeding 50%; each edge is labeled with its support value. Edges with support values below this threshold are indicated by dashed lines.