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An Evolutionary-Network Model Reveals Stratified Interactions in the V3 Loop of the HIV-1 Envelope

Figure 2

Distribution of the Marginal Posterior Probability of Network Edges

This histogram indicates the frequency of the marginal posterior probability of the 528 possible edges, sampled from a Markov chain over the space of node orders (see Materials and Methods). The prior probability of each edge was set to the uninformative value of 0.5. Note that the vertical range of the histogram was truncated to a maximum of 50; the first bin of the histogram contained 485 edges as indicated on the figure. Individual values are indicated by tick marks along the x-axis. A red line indicates the arbitrary cutoff value of 0.95.

Figure 2

doi: https://doi.org/10.1371/journal.pcbi.0030231.g002