A Statistical Framework for Modeling HLA-Dependent T Cell Response Data
Figure 2
Actual versus Estimated FDR (A) and False Negatives versus False Positives (B)
Results from using our model selection procedure and FDR estimation procedure on three datasets generated from a synthetic model learned on the real HIV data. There is a one-to-one correspondence between the points plotted in each figure.
(A) Estimated and actual FDR. The dashed line denotes the idealized curve.
(B) The number of false negatives (qij not recovered in these experiments, but appearing in the synthetic model), compared with the number of false positives (qij recovered in these experiments, but not in the synthetic model).