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Computational Model Explains High Activity and Rapid Cycling of Rho GTPases within Protein Complexes

Figure 1

Reaction Scheme of the Small GTPase Cycle

The three forms of the GTPase (RD, RT, and nucleotide-free R) (middle layer) form complexes with a GEF (E) (bottom layer) and a GAP (A) (top layer). Solid arrows indicate the main reaction fluxes. All reactions except GTP hydrolyses (2 → 1, 6 → 8, 5 → 3) are reversible. Numbering of the species is consistent with the reaction rate constants listed in Table 3. Free GTP (T), GDP (D), GEF, and GAP are not shown for simplicity.

Figure 1

doi: https://doi.org/10.1371/journal.pcbi.0020172.g001