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Open Access
Peer-reviewed
Research Article
Balanced DNA interpolation improves learning of genetic distance-informed embeddings in plants
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Lara M. Kösters ,
Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Project administration, Software, Validation, Visualization, Writing – original draft, Writing – review & editing
* E-mail: lkoesters@bgc-jena.mpg.de
Affiliations Biodiversity, Ecosystems and Society Group, Max Planck Institute for Biogeochemistry, Jena, Germany, Data-intensive Systems and Visualization (dAI.SY), Technische Universität Ilmenau, Ilmenau, Germany
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Kevin Karbstein,
Roles Conceptualization, Data curation, Methodology, Visualization, Writing – review & editing
Affiliations Biodiversity, Ecosystems and Society Group, Max Planck Institute for Biogeochemistry, Jena, Germany, Data-intensive Systems and Visualization (dAI.SY), Technische Universität Ilmenau, Ilmenau, Germany, Laboratory of Molecular Systematics and Evolutionary Genetics, Florida Museum of Natural History, University of Florida, Gainesville, Florida, United States of America, Professorship of Integrative Plant Taxonomy, Friedrich Schiller University Jena, Jena, Germany
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Ladislav Hodač,
Roles Conceptualization, Methodology, Visualization, Writing – original draft, Writing – review & editing
Affiliation Biodiversity, Ecosystems and Society Group, Max Planck Institute for Biogeochemistry, Jena, Germany
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Laura Albreht,
Roles Data curation, Writing – review & editing
Affiliation Unit of Evolutionary Biology and Ecology CP160/12, Université Libre de Bruxelles, Brussels, Belgium
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Elvira Sahuquillo Balbuena,
Roles Data curation, Writing – review & editing
Affiliation Evolutionary Biology Research Group (GIBE), Departamento de Bioloxía, Facultade de Ciencias, Universidade da Coruña, A Coruña, Spain
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Daniel Botello,
Roles Data curation, Writing – review & editing
Affiliation Department of Biological Sciences, Boise State University, Boise, Idaho, United States of America
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Olivier Hardy,
Roles Data curation, Writing – review & editing
Affiliation Unit of Evolutionary Biology and Ecology CP160/12, Université Libre de Bruxelles, Brussels, Belgium
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Phebian Odufuwa,
Roles Data curation, Writing – review & editing
Affiliation Department of Biological Sciences, Boise State University, Boise, Idaho, United States of America
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Eva Pardo Otero,
Roles Data curation, Writing – review & editing
Affiliation Evolutionary Biology Research Group (GIBE), Centre of Information and Communication Technologies (CITIC), Universidade da Coruña, A Coruña, Spain
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Aireen Phang,
Roles Data curation, Writing – review & editing
Affiliations Singapore Botanic Gardens, National Parks Board, Singapore, Singapore, Taxonomy and Macroecology Group, Royal Botanic Garden Edinburgh, Edinburgh, United Kingdom
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Manuel Pimentel,
Roles Data curation, Writing – review & editing
Affiliation Evolutionary Biology Research Group (GIBE), Departamento de Bioloxía, Facultade de Ciencias, Universidade da Coruña, A Coruña, Spain
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Rosalía Piñeiro,
Roles Data curation, Writing – review & editing
Affiliation Evolutionary Biology Research Group (GIBE), Interdisciplinary Centre of Chemistry and Biology (CICA), Universidade da Coruña, A Coruña, Spain
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James Smith,
Roles Data curation, Writing – review & editing
Affiliation Department of Biological Sciences, Boise State University, Boise, Idaho, United States of America
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Peter Wilkie,
Roles Data curation, Writing – review & editing
Affiliation Taxonomy and Macroecology Group, Royal Botanic Garden Edinburgh, Edinburgh, United Kingdom
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Patrick Mäder ,
Roles Funding acquisition, Supervision, Writing – review & editing
¶☯ These authors share senior authorship on this work.
Affiliations Data-intensive Systems and Visualization (dAI.SY), Technische Universität Ilmenau, Ilmenau, Germany, Institute of Biodiversity, Ecology and Evolution, Friedrich Schiller University Jena, Jena, Germany, German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
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Jana Wäldchen
Roles Conceptualization, Funding acquisition, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing
¶☯ These authors share senior authorship on this work.
Affiliations Biodiversity, Ecosystems and Society Group, Max Planck Institute for Biogeochemistry, Jena, Germany, German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig, Germany
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Balanced DNA interpolation improves learning of genetic distance-informed embeddings in plants
- Lara M. Kösters,
- Kevin Karbstein,
- Ladislav Hodač,
- Laura Albreht,
- Elvira Sahuquillo Balbuena,
- Daniel Botello,
- Olivier Hardy,
- Phebian Odufuwa,
- Eva Pardo Otero,
- Aireen Phang
- Published: September 3, 2026
- https://doi.org/10.1371/journal.pcbi.1014722