A portable recalibration workflow for reference-based variant calling in non-human genomes

Hyeonjung Lee; Sunhee Kim; Michelle Audrelia Sunartha; Chang-Yong Lee; Young-suk Lee

doi:10.1371/journal.pcbi.1014603

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Open Access

Peer-reviewed

Research Article

A portable recalibration workflow for reference-based variant calling in non-human genomes

Hyeonjung Lee ,

Roles Data curation, Formal analysis, Investigation, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

¶☯ Hyeonjung Lee and Sunhee Kim contributed equally to this work.

Affiliation Department of Bio and Brain Engineering, Korea Advanced Institute of Science and Technology, Daejeon, Republic of Korea
⨯
Sunhee Kim ,

Roles Data curation, Formal analysis, Funding acquisition, Investigation, Software, Writing – original draft, Writing – review & editing

¶☯ Hyeonjung Lee and Sunhee Kim contributed equally to this work.

Affiliation Department of Industrial and Systems Engineering, Kongju National University, Cheonan, Republic of Korea
⨯
Michelle Audrelia Sunartha,

Roles Formal analysis, Investigation, Software, Validation, Writing – original draft

Affiliation Department of Bio and Brain Engineering, Korea Advanced Institute of Science and Technology, Daejeon, Republic of Korea
⨯
Chang-Yong Lee ,

Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing

* E-mail: clee@kongju.ac.kr (CYL); youngl@kaist.ac.kr (YL)

Affiliation Department of Industrial and Systems Engineering, Kongju National University, Cheonan, Republic of Korea

https://orcid.org/0000-0003-1778-6532

⨯
Young-suk Lee

Roles Conceptualization, Funding acquisition, Methodology, Project administration, Resources, Supervision, Visualization, Writing – original draft, Writing – review & editing

* E-mail: clee@kongju.ac.kr (CYL); youngl@kaist.ac.kr (YL)

Affiliations Department of Bio and Brain Engineering, Korea Advanced Institute of Science and Technology, Daejeon, Republic of Korea, Graduate School of Engineering Biology, Korea Advanced Institute of Science and Technology, Daejeon, Republic of Korea

https://orcid.org/0000-0003-0220-9951

⨯

A portable recalibration workflow for reference-based variant calling in non-human genomes

Hyeonjung Lee,
Sunhee Kim,
Michelle Audrelia Sunartha,
Chang-Yong Lee,
Young-suk Lee

Published: August 20, 2026
https://doi.org/10.1371/journal.pcbi.1014603

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