PumpKin: A machine-learning pipeline for automatically tracking localized kinematics in freely moving C. elegans

• Erin Shappell,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliations Interdisciplinary Program in Bioengineering, Georgia Institute of Technology, Atlanta, GeorgiaUnited States of America, School of Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, GeorgiaUnited States of America

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• Debra Buggs,

  Roles Data curation, Investigation

  Affiliation School of Chemical & Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GeorgiaUnited States of America

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• Jennah Walcott,

  Roles Data curation, Investigation

  Affiliation Coulter Department of Biomedical Engineering, Georgia Institute of Technology, Atlanta, GeorgiaUnited States of America

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• Hang Lu

  Roles Conceptualization, Funding acquisition, Methodology, Project administration, Resources, Supervision, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: hang.lu@gatech.edu

  Affiliations Interdisciplinary Program in Bioengineering, Georgia Institute of Technology, Atlanta, GeorgiaUnited States of America, School of Chemical & Biomolecular Engineering, Georgia Institute of Technology, Atlanta, GeorgiaUnited States of America

  https://orcid.org/0000-0002-6881-660X

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