CARGO: A Cytometry Analysis framework via Regularized Graph Optimal-transport

• Abida Sanjana Shemonti,

  Roles Formal analysis, Investigation, Methodology, Resources, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Department of Computer Science, Purdue University, West Lafayette, Indiana, United States of America

  https://orcid.org/0000-0001-9833-3716

  ⨯
• Grzegorz B. Gmyrek,

  Roles Formal analysis, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Miftek Corporation, West Lafayette, Indiana, United States of America

  ⨯
• Katrien L. A. Quintelier,

  Roles Data curation, Investigation, Writing – original draft, Writing – review & editing

  Affiliations Department of Pulmonary Medicine, Erasmus Medical Center, Rotterdam, Zuid-Holland, The Netherlands, Data Mining and Modeling for Biomedicine, VIB Center for Inflammation Research, Ghent, Belgium, Department of Mathematics, Computer Science and Statistics, Ghent University, Ghent, Belgium

  https://orcid.org/0000-0001-5306-5615

  ⨯
• Sofie Van Gassen,

  Roles Data curation, Investigation, Writing – original draft, Writing – review & editing

  Affiliations Data Mining and Modeling for Biomedicine, VIB Center for Inflammation Research, Ghent, Belgium, Department of Mathematics, Computer Science and Statistics, Ghent University, Ghent, Belgium

  ⨯
• Yvan Saeys,

  Roles Data curation, Investigation

  Affiliations Data Mining and Modeling for Biomedicine, VIB Center for Inflammation Research, Ghent, Belgium, Department of Mathematics, Computer Science and Statistics, Ghent University, Ghent, Belgium

  ⨯
• Marcella Willemsen,

  Roles Data curation, Investigation

  Affiliation Department of Pulmonary Medicine, Erasmus Medical Center, Rotterdam, Zuid-Holland, The Netherlands

  ⨯
• Joachim G. J. V. Aerts,

  Roles Data curation, Investigation

  Affiliation Data Mining and Modeling for Biomedicine, VIB Center for Inflammation Research, Ghent, Belgium

  ⨯
• Eva V. E. Madsen,

  Roles Data curation, Investigation

  Affiliation Department of Surgical Oncology, Erasmus Medical Center, Rotterdam, The Netherlands

  ⨯
• J. Paul Robinson,

  Roles Conceptualization, Funding acquisition, Methodology, Project administration, Supervision, Validation, Writing – original draft, Writing – review & editing

  Affiliation Department of Basic Medical Science, College of Veterinary Medicine & Weldon School of Biomedical Engineering, Purdue University, West Lafayette, Indiana, United States of America

  ⨯
• Alex Pothen,

  Roles Funding acquisition, Methodology, Supervision, Validation, Writing – original draft, Writing – review & editing

  Affiliation Department of Computer Science, Purdue University, West Lafayette, Indiana, United States of America

  ⨯
• Bartek Rajwa

  Roles Conceptualization, Methodology, Project administration, Supervision, Validation, Writing – original draft, Writing – review & editing

  * E-mail: brajwa@purdue.edu

  Affiliation Bindley Bioscience Center, Purdue University, West Lafayette, Indiana, United States of America

  https://orcid.org/0000-0001-7540-8236

  ⨯