StPedf: Cell trajectory inference of spatial transcriptomics via spatial proximity embedding and spatial density-adaptive fusion

• Yuan Zhang,

  Roles Conceptualization, Data curation, Investigation, Methodology, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation School of Science, Jiangnan University, Wuxi, Jiangsu, China

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• Ziyan Sun,

  Roles Data curation, Investigation

  Affiliation School of Science, Jiangnan University, Wuxi, Jiangsu, China

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• Zhixin Shi,

  Roles Data curation, Investigation

  Affiliation School of Science, Jiangnan University, Wuxi, Jiangsu, China

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• Mengdi Nan,

  Roles Data curation, Investigation

  Affiliation School of Science, Jiangnan University, Wuxi, Jiangsu, China

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• Yuhan Fu,

  Roles Investigation, Visualization

  Affiliation School of Science, Jiangnan University, Wuxi, Jiangsu, China

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• Qing Ren,

  Roles Investigation, Visualization

  Affiliation School of Science, Jiangnan University, Wuxi, Jiangsu, China

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• Jie Gao

  Roles Supervision, Validation, Writing – review & editing

  * E-mail: gaojie@jiangnan.edu.cn

  Affiliation School of Science, Jiangnan University, Wuxi, Jiangsu, China

  https://orcid.org/0000-0002-5189-8338

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