Utilizing virus genomic surveillance to predict vaccine effectiveness

• Jiye Kwon ,

  Roles Data curation, Formal analysis, Investigation, Methodology, Project administration, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: jiye.kwon@yale.edu

  Affiliations Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, United States of America, Public Health Modeling Unit, Yale School of Public Health, New Haven, Connecticut, United States of America

  https://orcid.org/0000-0002-2707-3547

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• Ke Li,

  Roles Conceptualization, Investigation, Methodology, Writing – review & editing

  Affiliations Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, United States of America, Public Health Modeling Unit, Yale School of Public Health, New Haven, Connecticut, United States of America

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• Joshua L. Warren,

  Roles Conceptualization, Formal analysis, Investigation, Methodology, Validation, Visualization, Writing – review & editing

  Affiliations Public Health Modeling Unit, Yale School of Public Health, New Haven, Connecticut, United States of America, Department of Biostatistics, Yale School of Public Health, New Haven, Connecticut, United States of America

  https://orcid.org/0000-0002-6274-6970

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• Sameer Pandya,

  Roles Data curation

  Affiliations Department of Laboratory Medicine, Yale School of Medicine, New Haven, Connecticut, United States of America, Yale School of Medicine Biorepository, Yale University, New Haven, Connecticut, United States of America

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• Anne M. Hahn,

  Roles Data curation, Investigation, Project administration, Writing – review & editing

  Affiliations Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, United States of America, Department of Microbiology and Immunology, University of Melbourne, at the Peter Doherty Institute for Infection and Immunity, Melbourne, Victoria, Australia

  https://orcid.org/0000-0003-0710-6775

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• Yale SARS-CoV-2 Genomic Surveillance Initiative,
• Virginia E. Pitzer ,

  Contributed equally to this work with: Virginia E. Pitzer, Daniel M. Weinberger, Nathan D. Grubaugh

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Validation, Writing – review & editing

  Affiliations Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, United States of America, Public Health Modeling Unit, Yale School of Public Health, New Haven, Connecticut, United States of America

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• Daniel M. Weinberger ,

  Contributed equally to this work with: Virginia E. Pitzer, Daniel M. Weinberger, Nathan D. Grubaugh

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Validation, Visualization, Writing – review & editing

  Affiliations Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, United States of America, Public Health Modeling Unit, Yale School of Public Health, New Haven, Connecticut, United States of America

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• Nathan D. Grubaugh

  Contributed equally to this work with: Virginia E. Pitzer, Daniel M. Weinberger, Nathan D. Grubaugh

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Supervision, Validation, Writing – review & editing

  Affiliations Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, United States of America, Public Health Modeling Unit, Yale School of Public Health, New Haven, Connecticut, United States of America, Department of Ecology and Evolutionary Biology, Yale University, New Haven, Connecticut, United States of America

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