MsgaBpred: A B-cell epitope predictor integrating AlphaFold3-predicted structures with multi-scale GCNs and pre-trained language model ESM-C

• Shanyue Wang,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Supervision, Validation, Visualization, Writing – original draft

  Affiliation School of Cyberspace Security (School of Cryptology), Hainan University, Haikou, China

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• Aoyun Geng,

  Roles Conceptualization, Data curation, Investigation, Methodology, Software, Visualization, Writing – review & editing

  Affiliation School of Computer Science and Technology, Hainan University, Haikou, China

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• Zhenjie Luo,

  Roles Conceptualization, Data curation, Investigation, Methodology, Software, Visualization

  Affiliation School of Computer Science and Technology, Hainan University, Haikou, China

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• Yazi Li,

  Roles Resources, Software, Visualization, Writing – original draft

  Affiliation School of Mathematics and Statistics, Hainan University, Haikou, China

  https://orcid.org/0000-0001-7055-3813

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• Junlin Xu,

  Roles Conceptualization, Data curation, Formal analysis, Software, Supervision, Writing – review & editing

  Affiliation School of Computer Science and Technology, Wuhan University of Science and Technology, Wuhan, Hubei, China

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• Yajie Meng,

  Roles Formal analysis, Investigation, Methodology, Supervision

  Affiliation School of Computer Science and Artificial Intelligence, Wuhan Textile University, Wuhan, Hubei, China

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• Leyi Wei,

  Roles Data curation, Funding acquisition, Investigation, Methodology, Writing – review & editing

  Affiliation Centre for Artificial Intelligence driven Drug Discovery, Faculty of Applied Science, Macao Polytechnic University, Macao SAR, China

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• Quan Zou,

  Roles Data curation, Funding acquisition, Investigation, Software, Supervision

  Affiliation Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China, Chengdu, China

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• Zilong Zhang ,

  Roles Conceptualization, Data curation, Funding acquisition, Methodology, Project administration, Writing – review & editing

  * E-mail: zhangzilong@hainanu.edu.cn (ZZ); wangtao@qmu.edu.cn (TW); feifeicui@hainanu.edu.cn (FC)

  Affiliation School of Computer Science and Technology, Hainan University, Haikou, China

  https://orcid.org/0000-0002-4934-1258

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• Tao Wang ,

  Roles Conceptualization, Funding acquisition, Investigation, Methodology, Resources, Software, Writing – review & editing

  * E-mail: zhangzilong@hainanu.edu.cn (ZZ); wangtao@qmu.edu.cn (TW); feifeicui@hainanu.edu.cn (FC)

  Affiliation Laboratory of Protein Structure and Function, Institute of Medicine and Pharmacy, Qiqihar Medical University, Qiqihar, Heilongjiang, China

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• Feifei Cui

  Roles Funding acquisition, Software, Supervision, Validation, Writing – review & editing

  * E-mail: zhangzilong@hainanu.edu.cn (ZZ); wangtao@qmu.edu.cn (TW); feifeicui@hainanu.edu.cn (FC)

  Affiliation School of Computer Science and Technology, Hainan University, Haikou, China

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