Accounting for Defective Viral Genomes in viral consensus genome reconstruction, application to influenza virus

• Kévin Da Silva,

  Roles Data curation, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliations Institut Pasteur, Université Versailles St-Quentin en Yvelines, Paris-Saclay INSERM UMR 1173 (2I), Université Paris Cité, Molecular Mechanisms of Multiplication of Pneumovirus, Assistance Publique des Hôpitaux de Paris, Paris, France, Institut Pasteur, Université Paris Cité, National Reference Center for Respiratory Viruses, Paris, France, Institut Pasteur, Université Paris Cité, Bioinformatics and Biostatistics Hub, Paris, France

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• Nadia Naffakh,

  Roles Investigation, Validation, Writing – review & editing

  Affiliation Institut Pasteur, Université Paris Cité, CNRS UMR3569, RNA Biology and Influenza Virus, Paris, France

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• Marie-Anne Rameix-Welti ,

  Roles Conceptualization, Funding acquisition, Investigation, Resources, Supervision, Validation, Writing – review & editing

  * E-mail: frederic.lemoine@pasteur.fr (FL); marie-anne.rameix-welti@pasteur.fr (M-AR-W)

  Affiliations Institut Pasteur, Université Versailles St-Quentin en Yvelines, Paris-Saclay INSERM UMR 1173 (2I), Université Paris Cité, Molecular Mechanisms of Multiplication of Pneumovirus, Assistance Publique des Hôpitaux de Paris, Paris, France, Institut Pasteur, Université Paris Cité, National Reference Center for Respiratory Viruses, Paris, France

  https://orcid.org/0000-0002-5901-3856

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• Frédéric Lemoine

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Resources, Software, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: frederic.lemoine@pasteur.fr (FL); marie-anne.rameix-welti@pasteur.fr (M-AR-W)

  Affiliations Institut Pasteur, Université Versailles St-Quentin en Yvelines, Paris-Saclay INSERM UMR 1173 (2I), Université Paris Cité, Molecular Mechanisms of Multiplication of Pneumovirus, Assistance Publique des Hôpitaux de Paris, Paris, France, Institut Pasteur, Université Paris Cité, National Reference Center for Respiratory Viruses, Paris, France, Institut Pasteur, Université Paris Cité, Bioinformatics and Biostatistics Hub, Paris, France

  https://orcid.org/0000-0001-9576-4449

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