PepLM-GNN: A graph neural network framework leveraging pre-trained language models for peptide-protein binding prediction

• Ke Yan,

  Roles Conceptualization, Funding acquisition, Methodology, Writing – original draft, Writing – review & editing

  Affiliations School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China, Zhongguancun Academy, Beijing, China

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• Meijing Li,

  Roles Conceptualization, Methodology, Software, Writing – original draft, Writing – review & editing

  Affiliation School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China

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• Shutao Chen,

  Roles Conceptualization, Methodology, Software, Writing – original draft

  Affiliation School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China

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• Tianyi Liu,

  Roles Conceptualization, Writing – original draft

  Affiliation School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China

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• Jing Hao,

  Roles Methodology, Writing – review & editing

  Affiliations School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China, Zhongguancun Academy, Beijing, China

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• Bin Liu ,

  Roles Funding acquisition, Project administration, Writing – original draft, Writing – review & editing

  * E-mail: bliu@bliulab.net (BL); zli@bliulab.net (ZL)

  Affiliations School of Computer Science and Technology, Beijing Institute of Technology, Beijing, China, Zhongguancun Academy, Beijing, China, SMBU-MSU-BIT Joint Laboratory on Bioinformatics and Engineering Biology, Shenzhen MSU-BIT University, Shenzhen, Guangdong, China

  https://orcid.org/0000-0002-8520-8374

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• Zhen Li

  Roles Conceptualization, Project administration, Writing – review & editing

  * E-mail: bliu@bliulab.net (BL); zli@bliulab.net (ZL)

  Affiliation SMBU-MSU-BIT Joint Laboratory on Bioinformatics and Engineering Biology, Shenzhen MSU-BIT University, Shenzhen, Guangdong, China

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