Panorama: A robust pangenome-based method for predicting and comparing biological systems across species

Jérôme Arnoux; Jean Mainguy; Laura Bry; Quentin Fernandez de Grado; Yazid Hoblos; David Vallenet; Alexandra Calteau

doi:10.1371/journal.pcbi.1013856

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Open Access

Peer-reviewed

Research Article

Panorama: A robust pangenome-based method for predicting and comparing biological systems across species

Jérôme Arnoux ,

Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

* E-mail: arnoux.jeromepj@gmail.com, acalteau@genoscope.cns.fr

Affiliation LABGeM, Génomique Métabolique, CEA, Genoscope, Institut François Jacob, Université d’Évry, Université Paris-Saclay, CNRS, Paris, France
⨯
Jean Mainguy,

Roles Methodology, Software, Writing – review & editing

Affiliation LABGeM, Génomique Métabolique, CEA, Genoscope, Institut François Jacob, Université d’Évry, Université Paris-Saclay, CNRS, Paris, France
⨯
Laura Bry,

Roles Investigation, Methodology, Software, Writing – review & editing

Affiliation LABGeM, Génomique Métabolique, CEA, Genoscope, Institut François Jacob, Université d’Évry, Université Paris-Saclay, CNRS, Paris, France
⨯
Quentin Fernandez de Grado,

Roles Investigation, Methodology, Software, Validation, Writing – review & editing

Affiliation LABGeM, Génomique Métabolique, CEA, Genoscope, Institut François Jacob, Université d’Évry, Université Paris-Saclay, CNRS, Paris, France

https://orcid.org/0009-0008-2092-045X

⨯
Yazid Hoblos,

Roles Investigation, Methodology, Software, Validation, Writing – review & editing

Affiliation LABGeM, Génomique Métabolique, CEA, Genoscope, Institut François Jacob, Université d’Évry, Université Paris-Saclay, CNRS, Paris, France

https://orcid.org/0009-0002-3991-0098

⨯
David Vallenet,

Roles Conceptualization, Funding acquisition, Project administration, Supervision, Writing – review & editing

Affiliation LABGeM, Génomique Métabolique, CEA, Genoscope, Institut François Jacob, Université d’Évry, Université Paris-Saclay, CNRS, Paris, France

https://orcid.org/0000-0001-6648-0332

⨯
Alexandra Calteau

Roles Conceptualization, Funding acquisition, Project administration, Supervision, Writing – review & editing

* E-mail: arnoux.jeromepj@gmail.com, acalteau@genoscope.cns.fr

Affiliation LABGeM, Génomique Métabolique, CEA, Genoscope, Institut François Jacob, Université d’Évry, Université Paris-Saclay, CNRS, Paris, France

https://orcid.org/0000-0002-5871-9347

⨯

Panorama: A robust pangenome-based method for predicting and comparing biological systems across species

Jérôme Arnoux,
Jean Mainguy,
Laura Bry,
Quentin Fernandez de Grado,
Yazid Hoblos,
David Vallenet,
Alexandra Calteau

Published: July 10, 2026
https://doi.org/10.1371/journal.pcbi.1013856

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