Cell-DINO: Self-supervised image-based embeddings for cell fluorescent microscopy

• Théo Moutakanni,

  Roles Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliations Meta Platforms Inc., FAIR, Paris, France, MICS, CentraleSupelec, Université Paris-Saclay, Gif-sur-Yvette, France

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• Camille Couprie,

  Roles Formal analysis, Investigation, Methodology, Project administration, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Meta Platforms Inc., FAIR, Paris, France

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• Seungeun Yi,

  Roles Formal analysis, Investigation, Software, Validation

  Affiliation Meta Platforms Inc., FAIR, Paris, France

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• Michael Doron,

  Roles Data curation, Formal analysis, Investigation, Methodology, Software

  Affiliation Broad Institute, Cambridge, Massachusetts, United States of America

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• Zitong S. Chen,

  Roles Data curation, Investigation, Software, Validation

  Affiliation Broad Institute, Cambridge, Massachusetts, United States of America

  https://orcid.org/0009-0009-4335-9922

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• Nikita Moshkov,

  Roles Data curation, Formal analysis, Investigation, Methodology, Software, Validation

  Affiliation Helmholtz Munich, Institute of Computational Biology, Neuherberg, Germany

  https://orcid.org/0000-0002-5823-4884

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• Elouan Gardes,

  Roles Software, Validation

  Affiliation Meta Platforms Inc., FAIR, Paris, France

  https://orcid.org/0009-0000-2953-0345

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• Mathilde Caron,

  Roles Methodology, Software

  Affiliation Google LLC DeepMind, Paris, France

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• Hugo Touvron,

  Roles Software

  Affiliation Meta Platforms Inc., FAIR, Paris, France

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• Armand Joulin,

  Roles Conceptualization

  Affiliation Google LLC DeepMind, Paris, France

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• Piotr Bojanowski,

  Roles Conceptualization, Methodology, Supervision, Writing – original draft, Writing – review & editing

  Affiliation Meta Platforms Inc., FAIR, Paris, France

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• Wolfgang M. Pernice,

  Roles Conceptualization, Data curation, Funding acquisition, Investigation, Software, Supervision, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Columbia University Irving Medical Center, Neurology, New York, New York, United States of America

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• Juan C. Caicedo

  Roles Conceptualization, Data curation, Funding acquisition, Investigation, Methodology, Project administration, Resources, Software, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: juan.caicedo@wisc.edu

  Affiliations Morgridge Institute for Research, Madison, Wisconsin, United States of America, Department of Biostatistics and Medical Informatics, University of Wisconsin–Madison, Madison, Wisconsin, United States of America

  https://orcid.org/0000-0002-1277-4631

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