STARCall integrates image stitching, alignment, and read calling to enable scalable analysis of in situ sequencing data

• Nicholas J. Bradley,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Resources, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Department of Genome Sciences, University of Washington, Seattle, Washington, United States of America

  https://orcid.org/0009-0001-2056-1679

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• Sriram Pendyala,

  Roles Investigation, Supervision, Writing – review & editing

  Affiliations Department of Genome Sciences, University of Washington, Seattle, Washington, United States of America, Medical Scientist Training Program, University of Washington, Seattle, Washington, United States of America

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• Katie Partington,

  Roles Investigation, Writing – review & editing

  Affiliations Department of Genome Sciences, University of Washington, Seattle, Washington, United States of America, Department of Bioengineering, University of Washington, Seattle, Washington, United States of America

  https://orcid.org/0009-0009-1502-7154

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• Douglas M. Fowler

  Roles Funding acquisition, Project administration, Supervision, Writing – review & editing

  * E-mail: dfowler@uw.edu

  Affiliations Department of Genome Sciences, University of Washington, Seattle, Washington, United States of America, Department of Bioengineering, University of Washington, Seattle, Washington, United States of America, Brotman Baty Institute for Precision Medicine, Seattle, Washington, United States of America

  https://orcid.org/0000-0001-7614-1713

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