HAPP: High-accuracy pipeline for processing deep metabarcoding data

• John Sundh ,

  Contributed equally to this work with: John Sundh, Emma Granqvist, Fredrik Ronquist

  Roles Formal analysis, Software, Writing – original draft, Writing – review & editing

  Affiliation Department of Biochemistry and Biophysics, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Stockholm University, Solna, Sweden

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• Emma Granqvist ,

  Contributed equally to this work with: John Sundh, Emma Granqvist, Fredrik Ronquist

  Roles Formal analysis, Writing – original draft, Writing – review & editing

  Affiliation Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden

  https://orcid.org/0000-0002-1513-1674

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• Ela Iwaszkiewicz-Eggebrecht,

  Roles Data curation, Writing – review & editing

  Affiliation Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden

  https://orcid.org/0000-0003-1412-1711

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• Lokeshwaran Manoharan,

  Roles Software, Writing – review & editing

  Affiliation Department of Laboratory Medicine, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Lund University, Lund, Sweden

  https://orcid.org/0000-0001-9751-5745

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• Laura J. A. van Dijk,

  Roles Data curation, Writing – review & editing

  Affiliation Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden

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• Robert Goodsell,

  Roles Data curation, Writing – review & editing

  Affiliation Department of Ecology, Swedish University of Agricultural Sciences (SLU), Uppsala, Sweden

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• Nerivania N. Godeiro,

  Roles Data curation, Writing – review & editing

  Affiliation Shanghai Natural History Museum, Shanghai Science & Technology Museum, Shanghai, People’s Republic of China

  https://orcid.org/0000-0002-1669-6124

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• Bruno C. Bellini,

  Roles Data curation, Writing – review & editing

  Affiliation Department of Botany and Zoology, Biosciences Center, Federal University of Rio Grande do Norte, Natal, Brazil

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• Johanna Orsholm,

  Roles Data curation, Writing – review & editing

  Affiliation Department of Ecology, Swedish University of Agricultural Sciences (SLU), Uppsala, Sweden

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• Piotr Łukasik,

  Roles Data curation, Writing – review & editing

  Affiliation Institute of Environmental Sciences, Faculty of Biology, Jagiellonian University, Krakow, Poland

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• Andreia Miraldo,

  Roles Data curation, Writing – review & editing

  Affiliations Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden, Biodiversity and Sustainability Solutions, Aveiras de Baixo, Portugal

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• Tomas Roslin,

  Roles Funding acquisition, Writing – review & editing

  Affiliation Department of Ecology, Swedish University of Agricultural Sciences (SLU), Uppsala, Sweden

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• Ayco J. M. Tack,

  Roles Funding acquisition, Writing – review & editing

  Affiliation Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden

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• Anders F. Andersson ,

  Roles Conceptualization, Formal analysis, Funding acquisition, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: fredrik.ronquist@nrm.se (FR); anders.andersson@scilifelab.se (AFA)

  Affiliation Department of Gene Technology, Science for Life Laboratory, KTH Royal Institute of Technology, Stockholm, Sweden

  https://orcid.org/0000-0002-3627-6899

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• Fredrik Ronquist

  Contributed equally to this work with: John Sundh, Emma Granqvist, Fredrik Ronquist

  Roles Conceptualization, Formal analysis, Funding acquisition, Software, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: fredrik.ronquist@nrm.se (FR); anders.andersson@scilifelab.se (AFA)

  Affiliation Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden

  https://orcid.org/0000-0002-3929-251X

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