Ten simple rules for building and maintaining sustainable high-performance computing infrastructure for research in resource-limited settings

• Ronald Galiwango ,

  Roles Conceptualization, Methodology, Writing – original draft, Writing – review & editing

  * E-mail: rgaliwango@idi.co.ug

  Affiliations The African Center of Excellence in Bioinformatics and Data-Intensive Sciences, Kampala, Uganda, The Infectious Diseases Institute (IDI), Makerere University, Kampala, Uganda, Open Data Science Platform (ODSP) for the DS-I Africa (Data Science Initiative for Africa), University of Cape Town, Cape Town, South Africa

  https://orcid.org/0000-0002-5962-151X

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• Christopher J. Whalen,

  Roles Writing – review & editing

  Affiliations Office of Cyber Infrastructure and Computational Biology (OCICB), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, Maryland, United States of America, Research Data and Communication Technologies Benefit Corp., Garrett Park, Maryland, United States of America

  https://orcid.org/0000-0002-1379-7392

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• Grace Kebirungi,

  Roles Project administration, Writing – review & editing

  Affiliations The African Center of Excellence in Bioinformatics and Data-Intensive Sciences, Kampala, Uganda, The Infectious Diseases Institute (IDI), Makerere University, Kampala, Uganda, Open Data Science Platform (ODSP) for the DS-I Africa (Data Science Initiative for Africa), University of Cape Town, Cape Town, South Africa

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• Mugume T. Atwine,

  Roles Writing – review & editing

  Affiliations The African Center of Excellence in Bioinformatics and Data-Intensive Sciences, Kampala, Uganda, The Infectious Diseases Institute (IDI), Makerere University, Kampala, Uganda, Open Data Science Platform (ODSP) for the DS-I Africa (Data Science Initiative for Africa), University of Cape Town, Cape Town, South Africa

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• Rodgers Kimera,

  Roles Writing – review & editing

  Affiliations The African Center of Excellence in Bioinformatics and Data-Intensive Sciences, Kampala, Uganda, Research Data and Communication Technologies Benefit Corp., Garrett Park, Maryland, United States of America

  https://orcid.org/0009-0000-6264-9233

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• Alfred Ssekagiri,

  Roles Writing – review & editing

  Affiliations Open Data Science Platform (ODSP) for the DS-I Africa (Data Science Initiative for Africa), University of Cape Town, Cape Town, South Africa, Uganda Virus Research Institute (UVRI), Entebbe, Uganda

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• Timothy W. Kimbowa,

  Roles Writing – review & editing

  Affiliations Open Data Science Platform (ODSP) for the DS-I Africa (Data Science Initiative for Africa), University of Cape Town, Cape Town, South Africa, Uganda Virus Research Institute (UVRI), Entebbe, Uganda

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• Edward Lukyamuzi,

  Roles Writing – review & editing

  Affiliations Open Data Science Platform (ODSP) for the DS-I Africa (Data Science Initiative for Africa), University of Cape Town, Cape Town, South Africa, Uganda Virus Research Institute (UVRI), Entebbe, Uganda

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• Mike Nsubuga,

  Roles Writing – review & editing

  Affiliations The African Center of Excellence in Bioinformatics and Data-Intensive Sciences, Kampala, Uganda, The Infectious Diseases Institute (IDI), Makerere University, Kampala, Uganda, Open Data Science Platform (ODSP) for the DS-I Africa (Data Science Initiative for Africa), University of Cape Town, Cape Town, South Africa

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• eLwazi ODSP,

  Affiliation Open Data Science Platform (ODSP) for the DS-I Africa (Data Science Initiative for Africa), University of Cape Town, Cape Town, South Africa

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• Lloyd Ssentongo,

  Roles Writing – review & editing

  Affiliation Research Data and Communication Technologies Benefit Corp., Garrett Park, Maryland, United States of America

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• Henry Mutegeki,

  Roles Writing – review & editing

  Affiliations The African Center of Excellence in Bioinformatics and Data-Intensive Sciences, Kampala, Uganda, The Infectious Diseases Institute (IDI), Makerere University, Kampala, Uganda

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• John M. Fonner,

  Roles Writing – review & editing

  Affiliation Texas Advanced Computing Center (TACC), University of Texas at Austin, Austin, Texas, United States of America

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• Frank Wuerthwein,

  Roles Writing – review & editing

  Affiliation University of California San Diego, La Jolla, California, United States of America

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• Ari Berman,

  Roles Writing – review & editing

  Affiliation BioTeam, Middleton, Massachusetts, United States of America

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• Laura B. Okalebo,

  Roles Writing – review & editing

  Affiliation BioTeam, Middleton, Massachusetts, United States of America

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• Meghan McCarthy,

  Roles Writing – review & editing

  Affiliation Office of Cyber Infrastructure and Computational Biology (OCICB), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, Maryland, United States of America

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• Victor S. Kramer,

  Roles Writing – review & editing

  Affiliation Office of Cyber Infrastructure and Computational Biology (OCICB), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, Maryland, United States of America

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• Mariam Quinones,

  Roles Writing – review & editing

  Affiliation Office of Cyber Infrastructure and Computational Biology (OCICB), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, Maryland, United States of America

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• Phillip Cruz,

  Roles Writing – review & editing

  Affiliation Office of Cyber Infrastructure and Computational Biology (OCICB), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, Maryland, United States of America

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• Darrell Hurt,

  Roles Writing – review & editing

  Affiliation Office of Cyber Infrastructure and Computational Biology (OCICB), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, Maryland, United States of America

  https://orcid.org/0000-0002-9829-8567

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• Maria Y. Giovanni,

  Roles Writing – review & editing

  Affiliation Office of Cyber Infrastructure and Computational Biology (OCICB), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, Maryland, United States of America

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• Nicola Mulder,

  Roles Funding acquisition, Supervision, Writing – review & editing

  Affiliations Open Data Science Platform (ODSP) for the DS-I Africa (Data Science Initiative for Africa), University of Cape Town, Cape Town, South Africa, Computational Biology Division, Department of Integrative Biomedical Sciences, IDM, University of Cape Town, Cape Town, South Africa

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• Michael Tartakovsky,

  Roles Writing – review & editing

  Affiliation Office of Cyber Infrastructure and Computational Biology (OCICB), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, Maryland, United States of America

  https://orcid.org/0000-0002-8132-9013

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• Jonathan Kayondo,

  Roles Funding acquisition, Supervision, Writing – review & editing

  Affiliations Open Data Science Platform (ODSP) for the DS-I Africa (Data Science Initiative for Africa), University of Cape Town, Cape Town, South Africa, Uganda Virus Research Institute (UVRI), Entebbe, Uganda

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•  [ ... ],
• Daudi Jjingo

  Roles Conceptualization, Funding acquisition, Supervision, Writing – original draft, Writing – review & editing

  Affiliations The African Center of Excellence in Bioinformatics and Data-Intensive Sciences, Kampala, Uganda, The Infectious Diseases Institute (IDI), Makerere University, Kampala, Uganda, Open Data Science Platform (ODSP) for the DS-I Africa (Data Science Initiative for Africa), University of Cape Town, Cape Town, South Africa, Department of Computer Science, College of Computing and Information Sciences, Makerere University, Kampala, Uganda

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