Multi-scale phylodynamic modelling of rapid punctuated pathogen evolution

• Quang Dang Nguyen ,

  Contributed equally to this work with: Quang Dang Nguyen, Sheryl L. Chang

  Roles Data curation, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Centre for Complex Systems, The University of Sydney, Sydney, New South Wales, Australia

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• Sheryl L. Chang ,

  Contributed equally to this work with: Quang Dang Nguyen, Sheryl L. Chang

  Roles Data curation, Formal analysis, Investigation, Methodology, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliations Centre for Complex Systems, The University of Sydney, Sydney, New South Wales, Australia, Sydney Infectious Diseases Institute, The University of Sydney, Sydney, New South Wales, Australia

  https://orcid.org/0000-0002-6119-828X

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• Carl J. E. Suster,

  Roles Investigation, Methodology, Writing – original draft, Writing – review & editing

  Affiliations Sydney Infectious Diseases Institute, The University of Sydney, Sydney, New South Wales, Australia, Centre for Infectious Diseases and Microbiology–Public Health, Westmead Hospital, Westmead, New South Wales, Australia

  https://orcid.org/0000-0001-7021-9380

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• Rebecca J. Rockett,

  Roles Investigation, Methodology, Writing – review & editing

  Affiliations Sydney Infectious Diseases Institute, The University of Sydney, Sydney, New South Wales, Australia, Centre for Infectious Diseases and Microbiology–Public Health, Westmead Hospital, Westmead, New South Wales, Australia

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• Vitali Sintchenko,

  Roles Conceptualization, Funding acquisition, Supervision, Writing – review & editing

  Affiliation Sydney Infectious Diseases Institute, The University of Sydney, Sydney, New South Wales, Australia

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• Tania C. Sorrell,

  Roles Conceptualization, Funding acquisition, Supervision, Writing – review & editing

  Affiliation Sydney Infectious Diseases Institute, The University of Sydney, Sydney, New South Wales, Australia

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• Mikhail Prokopenko

  Roles Conceptualization, Funding acquisition, Investigation, Methodology, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: mikhail.prokopenko@sydney.edu.au

  Affiliations Centre for Complex Systems, The University of Sydney, Sydney, New South Wales, Australia, Sydney Infectious Diseases Institute, The University of Sydney, Sydney, New South Wales, Australia

  https://orcid.org/0000-0002-4215-0344

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