DeepDeconUQ estimates malignant cell fraction prediction intervals in bulk RNA-seq tissue

• Jiawei Huang,

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Resources, Software, Validation, Visualization, Writing – original draft

  Affiliation Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, California, United States of America

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• Yuxuan Du,

  Roles Data curation, Formal analysis, Investigation, Methodology, Resources, Software, Validation, Visualization, Writing – original draft

  Affiliations Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, California, United States of America, Department of Electrical and Computer Engineering, University of Texas at San Antonio, San Antonio, Texas, United States of America

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• Kevin R. Kelly,

  Roles Resources, Validation, Writing – review & editing

  Affiliation Division of Hematology, University of Southern California, Los Angeles, California, United States of America

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• Jinchi Lv,

  Roles Methodology, Writing – review & editing

  Affiliation Data Sciences and Operations Department, University of Southern California, Los Angeles, California, United States of America

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• Yingying Fan,

  Roles Methodology, Writing – review & editing

  Affiliation Data Sciences and Operations Department, University of Southern California, Los Angeles, California, United States of America

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• Jiang F. Zhong ,

  Roles Conceptualization, Funding acquisition, Methodology, Project administration, Resources, Supervision, Writing – review & editing

  * E-mail: fsun@usc.edu (FS); jzhong@llu.edu (JFZ)

  Affiliation Department of Basic Sciences, School of Medicine, Loma Linda University, Loma Linda, California, United States of America

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• Fengzhu Sun

  Roles Conceptualization, Funding acquisition, Methodology, Project administration, Supervision, Writing – review & editing

  * E-mail: fsun@usc.edu (FS); jzhong@llu.edu (JFZ)

  Affiliation Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, California, United States of America

  https://orcid.org/0000-0002-8552-043X

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