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Open Access
Peer-reviewed
Research Article
Machine learning-based prediction reveals kinase MAP4K4 regulates neutrophil differentiation through phosphorylating apoptosis-related proteins
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Guihua Wang ,
Contributed equally to this work with: Guihua Wang, Dan Zhang, Zhifeng He
Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Project administration, Resources, Validation, Visualization, Writing – original draft, Writing – review & editing
Affiliation Key Laboratory of Birth Defects and Related Diseases of Women and Children of MOE, Department of Laboratory Medicine, State Key Laboratory of Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, Sichuan, China
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Dan Zhang ,
Contributed equally to this work with: Guihua Wang, Dan Zhang, Zhifeng He
Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Project administration, Software, Validation, Visualization, Writing – original draft, Writing – review & editing
Affiliation Key Laboratory of Birth Defects and Related Diseases of Women and Children of MOE, Department of Laboratory Medicine, State Key Laboratory of Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, Sichuan, China
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Zhifeng He ,
Contributed equally to this work with: Guihua Wang, Dan Zhang, Zhifeng He
Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing
Affiliation Key Laboratory of Birth Defects and Related Diseases of Women and Children of MOE, Department of Laboratory Medicine, State Key Laboratory of Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, Sichuan, China
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Bin Mao,
Roles Conceptualization, Methodology, Resources, Supervision, Writing – original draft, Writing – review & editing
Affiliation Key Laboratory of Birth Defects and Related Diseases of Women and Children of MOE, Department of Laboratory Medicine, State Key Laboratory of Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, Sichuan, China
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Xiao Hu,
Roles Methodology, Resources, Writing – original draft, Writing – review & editing
Affiliation Key Laboratory of Birth Defects and Related Diseases of Women and Children of MOE, Department of Laboratory Medicine, State Key Laboratory of Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, Sichuan, China
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Li Chen,
Roles Methodology, Resources, Software, Writing – original draft, Writing – review & editing
Affiliation Biosafety Laboratory of West China Hospital, State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Qingxin Yang,
Roles Methodology, Resources, Software, Writing – original draft, Writing – review & editing
Affiliation Biosafety Laboratory of West China Hospital, State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Zhen Zhou,
Roles Methodology, Resources, Writing – original draft, Writing – review & editing
Affiliation Key Laboratory of Birth Defects and Related Diseases of Women and Children of MOE, Department of Laboratory Medicine, State Key Laboratory of Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, Sichuan, China
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Yating Zhang,
Roles Methodology, Resources, Writing – original draft, Writing – review & editing
Affiliation Key Laboratory of Birth Defects and Related Diseases of Women and Children of MOE, Department of Laboratory Medicine, State Key Laboratory of Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, Sichuan, China
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Kepan Linghu,
Roles Methodology, Resources, Software
Affiliation Key Laboratory of Birth Defects and Related Diseases of Women and Children of MOE, Department of Laboratory Medicine, State Key Laboratory of Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, Sichuan, China
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Chao Tang,
Roles Funding acquisition, Resources, Software
Affiliation Biosafety Laboratory of West China Hospital, State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China
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Zijie Xu,
Roles Methodology, Software, Writing – original draft, Writing – review & editing
Affiliation Key Laboratory of Birth Defects and Related Diseases of Women and Children of MOE, Department of Laboratory Medicine, State Key Laboratory of Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, Sichuan, China
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Defu Liu,
Roles Software, Writing – original draft, Writing – review & editing
Affiliation Key Laboratory of Birth Defects and Related Diseases of Women and Children of MOE, Department of Laboratory Medicine, State Key Laboratory of Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, Sichuan, China
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Junwei Song,
Roles Software, Writing – original draft, Writing – review & editing
Affiliation Key Laboratory of Birth Defects and Related Diseases of Women and Children of MOE, Department of Laboratory Medicine, State Key Laboratory of Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, Sichuan, China
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Huiying Wang,
Roles Software, Writing – original draft, Writing – review & editing
Affiliation Key Laboratory of Birth Defects and Related Diseases of Women and Children of MOE, Department of Laboratory Medicine, State Key Laboratory of Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, Sichuan, China
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Yishan Lin,
Roles Software, Writing – original draft
Affiliation Key Laboratory of Birth Defects and Related Diseases of Women and Children of MOE, Department of Laboratory Medicine, State Key Laboratory of Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, Sichuan, China
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Ruihan Li,
Roles Software
Affiliation Key Laboratory of Birth Defects and Related Diseases of Women and Children of MOE, Department of Laboratory Medicine, State Key Laboratory of Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, Sichuan, China
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Jing-Wen Lin ,
Roles Conceptualization, Formal analysis, Funding acquisition, Methodology, Project administration, Resources, Supervision, Writing – original draft, Writing – review & editing
* E-mail: lin.jingwen@scu.edu.cn (JWL); luchen@scu.edu.cn (LC)
Affiliation Biosafety Laboratory of West China Hospital, State Key Laboratory of Biotherapy, West China Hospital, Sichuan University, Chengdu, Sichuan, China
⨯ - [ ... ],
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Lu Chen
Roles Conceptualization, Formal analysis, Funding acquisition, Methodology, Project administration, Resources, Software, Supervision, Writing – original draft, Writing – review & editing
* E-mail: lin.jingwen@scu.edu.cn (JWL); luchen@scu.edu.cn (LC)
Affiliation Key Laboratory of Birth Defects and Related Diseases of Women and Children of MOE, Department of Laboratory Medicine, State Key Laboratory of Biotherapy, West China Second University Hospital, Sichuan University, Chengdu, Sichuan, China
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Machine learning-based prediction reveals kinase MAP4K4 regulates neutrophil differentiation through phosphorylating apoptosis-related proteins
- Guihua Wang,
- Dan Zhang,
- Zhifeng He,
- Bin Mao,
- Xiao Hu,
- Li Chen,
- Qingxin Yang,
- Zhen Zhou,
- Yating Zhang,
- Kepan Linghu
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- Published: March 17, 2025
- https://doi.org/10.1371/journal.pcbi.1012877