Exploring the potential of structure-based deep learning approaches for T cell receptor design

• Helder V. Ribeiro-Filho ,

  Roles Conceptualization, Data curation, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: helder.ribeiro@lnbio.cnpem.br (HVRF); pierce@umd.edu (BGP); paulo.oliveira@lnbio.cnpem.br (PSLO)

  ¶‡ These authors joint first authorship on this work.

  Affiliation Brazilian Biosciences National Laboratory, Brazilian Center for Research in Energy and Materials, Campinas, São Paulo, Brazil

  https://orcid.org/0000-0001-8471-207X

  ⨯
• Gabriel E. Jara ,

  Roles Data curation, Formal analysis, Investigation, Methodology, Validation, Visualization, Writing – original draft, Writing – review & editing

  ¶‡ These authors joint first authorship on this work.

  Affiliation Brazilian Biosciences National Laboratory, Brazilian Center for Research in Energy and Materials, Campinas, São Paulo, Brazil

  https://orcid.org/0000-0002-5831-1392

  ⨯
• João V. S. Guerra,

  Roles Formal analysis, Investigation, Methodology, Validation, Writing – original draft, Writing – review & editing

  Affiliations Brazilian Biosciences National Laboratory, Brazilian Center for Research in Energy and Materials, Campinas, São Paulo, Brazil, Graduate Program in Pharmaceutical Sciences, Faculty of Pharmaceutical Sciences, University of Campinas, Campinas, São Paulo, Brazil

  https://orcid.org/0000-0002-6800-4425

  ⨯
• Melyssa Cheung,

  Roles Data curation, Formal analysis, Writing – original draft, Writing – review & editing

  Affiliations Institute for Bioscience and Biotechnology Research, University of Maryland, Rockville, Maryland, United States of America, Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland, United States of America

  https://orcid.org/0000-0002-3232-2034

  ⨯
• Nathaniel R. Felbinger,

  Roles Data curation, Formal analysis, Writing – original draft, Writing – review & editing

  Affiliations Institute for Bioscience and Biotechnology Research, University of Maryland, Rockville, Maryland, United States of America, Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland, United States of America

  ⨯
• José G. C. Pereira,

  Roles Formal analysis, Investigation, Methodology, Writing – original draft, Writing – review & editing

  Affiliation Brazilian Biosciences National Laboratory, Brazilian Center for Research in Energy and Materials, Campinas, São Paulo, Brazil

  https://orcid.org/0000-0003-1041-0209

  ⨯
• Brian G. Pierce ,

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Validation, Writing – original draft, Writing – review & editing

  * E-mail: helder.ribeiro@lnbio.cnpem.br (HVRF); pierce@umd.edu (BGP); paulo.oliveira@lnbio.cnpem.br (PSLO)

  Affiliations Institute for Bioscience and Biotechnology Research, University of Maryland, Rockville, Maryland, United States of America, Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, Maryland, United States of America

  https://orcid.org/0000-0003-4821-0368

  ⨯
• Paulo S. Lopes-de-Oliveira

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: helder.ribeiro@lnbio.cnpem.br (HVRF); pierce@umd.edu (BGP); paulo.oliveira@lnbio.cnpem.br (PSLO)

  Affiliations Brazilian Biosciences National Laboratory, Brazilian Center for Research in Energy and Materials, Campinas, São Paulo, Brazil, Graduate Program in Pharmaceutical Sciences, Faculty of Pharmaceutical Sciences, University of Campinas, Campinas, São Paulo, Brazil

  https://orcid.org/0000-0002-1287-8019

  ⨯