iCRBP-LKHA: Large convolutional kernel and hybrid channel-spatial attention for identifying circRNA-RBP interaction sites

Lin Yuan; Ling Zhao; Jinling Lai; Yufeng Jiang; Qinhu Zhang; Zhen Shen; Chun-Hou Zheng; De-Shuang Huang

doi:10.1371/journal.pcbi.1012399

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Open Access

Peer-reviewed

Research Article

iCRBP-LKHA: Large convolutional kernel and hybrid channel-spatial attention for identifying circRNA-RBP interaction sites

Lin Yuan,

Roles Conceptualization, Data curation, Funding acquisition, Investigation, Methodology, Project administration, Visualization, Writing – original draft, Writing – review & editing

Affiliations Key Laboratory of Computing Power Network and Information Security, Ministry of Education, Shandong Computer Science Center, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China, Shandong Engineering Research Center of Big Data Applied Technology, Faculty of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China, Shandong Provincial Key Laboratory of Computer Networks, Shandong Fundamental Research Center for Computer Science, Jinan, China

https://orcid.org/0000-0002-9694-8191

⨯
Ling Zhao,

Roles Conceptualization, Data curation, Methodology, Software, Visualization, Writing – original draft, Writing – review & editing

Affiliations Key Laboratory of Computing Power Network and Information Security, Ministry of Education, Shandong Computer Science Center, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China, Shandong Engineering Research Center of Big Data Applied Technology, Faculty of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China, Shandong Provincial Key Laboratory of Computer Networks, Shandong Fundamental Research Center for Computer Science, Jinan, China
⨯
Jinling Lai,

Roles Conceptualization, Data curation, Methodology, Software, Visualization, Writing – original draft, Writing – review & editing

Affiliations Key Laboratory of Computing Power Network and Information Security, Ministry of Education, Shandong Computer Science Center, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China, Shandong Engineering Research Center of Big Data Applied Technology, Faculty of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China, Shandong Provincial Key Laboratory of Computer Networks, Shandong Fundamental Research Center for Computer Science, Jinan, China
⨯
Yufeng Jiang,

Roles Conceptualization, Data curation, Methodology, Software, Visualization, Writing – original draft, Writing – review & editing

Affiliations Key Laboratory of Computing Power Network and Information Security, Ministry of Education, Shandong Computer Science Center, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China, Shandong Engineering Research Center of Big Data Applied Technology, Faculty of Computer Science and Technology, Qilu University of Technology (Shandong Academy of Sciences), Jinan, China, Shandong Provincial Key Laboratory of Computer Networks, Shandong Fundamental Research Center for Computer Science, Jinan, China
⨯
Qinhu Zhang,

Roles Conceptualization, Methodology, Software, Writing – original draft, Writing – review & editing

Affiliation Eastern Institute for Advanced Study, Eastern Institute of Technology, Ningbo, China
⨯
Zhen Shen ,

Roles Conceptualization, Data curation, Funding acquisition, Methodology, Project administration, Software, Supervision, Writing – original draft, Writing – review & editing

* E-mail: zzuliszhen@163.com; zhengch99@126.com; dshuang@eias.ac.cn

Affiliation School of Computer and Software, Nanyang Institute of Technology, Nanyang, China
⨯
Chun-Hou Zheng ,

Roles Conceptualization, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Writing – original draft, Writing – review & editing

* E-mail: zzuliszhen@163.com; zhengch99@126.com; dshuang@eias.ac.cn

Affiliation Key Lab of Intelligent Computing and Signal Processing of Ministry of Education, School of Artificial Intelligence, Anhui University, Hefei, China
⨯
De-Shuang Huang

Roles Conceptualization, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Writing – original draft, Writing – review & editing

* E-mail: zzuliszhen@163.com; zhengch99@126.com; dshuang@eias.ac.cn

Affiliation Eastern Institute for Advanced Study, Eastern Institute of Technology, Ningbo, China
⨯

iCRBP-LKHA: Large convolutional kernel and hybrid channel-spatial attention for identifying circRNA-RBP interaction sites

Lin Yuan,
Ling Zhao,
Jinling Lai,
Yufeng Jiang,
Qinhu Zhang,
Zhen Shen,
Chun-Hou Zheng,
De-Shuang Huang

Published: August 22, 2024
https://doi.org/10.1371/journal.pcbi.1012399

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