CNTools: A computational toolbox for cellular neighborhood analysis from multiplexed images

• Yicheng Tao,

  Roles Conceptualization, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Department of Electrical Engineering and Computer Science, University of Michigan, Ann Arbor, Michigan, United States of America

  https://orcid.org/0000-0001-9615-4976

  ⨯
• Fan Feng,

  Roles Writing – review & editing

  Affiliation Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, United States of America

  ⨯
• Xin Luo,

  Roles Software, Writing – review & editing

  Affiliation Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, United States of America

  ⨯
• Conrad V. Reihsmann,

  Roles Writing – review & editing

  Affiliation Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America

  https://orcid.org/0000-0002-1482-5359

  ⨯
• Alexander L. Hopkirk,

  Roles Writing – review & editing

  Affiliation Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America

  ⨯
• Jean-Philippe Cartailler,

  Roles Writing – review & editing

  Affiliation Center for Stem Cell Biology, Vanderbilt University, Nashville, Tennessee, United States of America

  ⨯
• Marcela Brissova,

  Roles Funding acquisition, Writing – review & editing

  Affiliation Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America

  ⨯
• Stephen C. J. Parker,

  Roles Funding acquisition, Writing – review & editing

  Affiliation Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, United States of America

  ⨯
• Diane C. Saunders ,

  Roles Data curation, Validation, Writing – review & editing

  * E-mail: diane.saunders@vumc.org (DCS); drjieliu@umich.edu (JL)

  Affiliation Department of Medicine, Vanderbilt University Medical Center, Nashville, Tennessee, United States of America

  ⨯
• Jie Liu

  Roles Conceptualization, Data curation, Funding acquisition, Methodology, Supervision, Writing – review & editing

  * E-mail: diane.saunders@vumc.org (DCS); drjieliu@umich.edu (JL)

  Affiliations Department of Electrical Engineering and Computer Science, University of Michigan, Ann Arbor, Michigan, United States of America, Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, United States of America

  https://orcid.org/0000-0002-9504-0587

  ⨯