Epigenetics is all you need: A transformer to decode chromatin structural compartments from the epigenome

• Esteban Dodero-Rojas ,

  Contributed equally to this work with: Esteban Dodero-Rojas, Angel Mendieta

  Roles Conceptualization, Investigation, Methodology, Software, Validation, Writing – original draft, Writing – review & editing

  Affiliation Center for Theoretical Biological Physics, Rice University, Houston, Texas, United States of America

  https://orcid.org/0000-0001-9054-9555

  ⨯
• Angel Mendieta ,

  Contributed equally to this work with: Esteban Dodero-Rojas, Angel Mendieta

  Roles Software, Validation, Writing – review & editing

  Affiliations Center for Theoretical Biological Physics, Rice University, Houston, Texas, United States of America, School of Physics, Universidad de Costa Rica, San Pedro de Montes de Oca, San José, Costa Rica

  ⨯
• Yao Fehlis,

  Roles Conceptualization, Methodology, Writing – original draft, Writing – review & editing

  Affiliation Research and Advanced Development, Advanced Micro Devices, Austin, Texas, United States of America

  ⨯
• Nicholas Mayala,

  Roles Conceptualization, Methodology

  Affiliation Research and Advanced Development, Advanced Micro Devices, Austin, Texas, United States of America

  ⨯
• Vinícius G. Contessoto ,

  Roles Conceptualization, Funding acquisition, Methodology, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: contessoto@rice.edu (VGC); jonuchic@rice.edu (JNO)

  Affiliations Center for Theoretical Biological Physics, Rice University, Houston, Texas, United States of America, Department of Physics and Astronomy, Rice University, Houston, Texas, United States of America

  https://orcid.org/0000-0002-1891-9563

  ⨯
• José N. Onuchic

  Roles Conceptualization, Funding acquisition, Methodology, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: contessoto@rice.edu (VGC); jonuchic@rice.edu (JNO)

  Affiliations Center for Theoretical Biological Physics, Rice University, Houston, Texas, United States of America, Department of Physics and Astronomy, Rice University, Houston, Texas, United States of America, Department of Chemistry, Rice University, Houston, Texas, United States of America, Department of Biosciences, Rice University, Houston, Texas, United States of America

  ⨯