Scuphr: A probabilistic framework for cell lineage tree reconstruction

• Hazal Koptagel,

  Roles Conceptualization, Formal analysis, Investigation, Methodology, Software, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliations School of EECS, KTH Royal Institute of Technology, Stockholm, Sweden, Science for Life Laboratory, Stockholm, Sweden

  https://orcid.org/0000-0002-6234-4656

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• Seong-Hwan Jun,

  Roles Conceptualization, Methodology, Software

  Affiliation Department of Biostatistics and Computational Biology, University of Rochester Medical Center, Rochester, New York, United States of America

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• Joanna Hård,

  Roles Investigation

  Affiliation Department of Cell and Molecular Biology, Karolinska Institutet, Stockholm, Sweden

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• Jens Lagergren

  Roles Conceptualization, Formal analysis, Funding acquisition, Investigation, Methodology, Project administration, Supervision, Writing – original draft

  * E-mail: jensl@kth.se

  Affiliations School of EECS, KTH Royal Institute of Technology, Stockholm, Sweden, Science for Life Laboratory, Stockholm, Sweden

  https://orcid.org/0000-0002-4552-0240

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