Physical modeling of ribosomes along messenger RNA: Estimating kinetic parameters from ribosome profiling experiments using a ballistic model

• Carole Chevalier,

  Roles Conceptualization, Writing – original draft

  Affiliation Laboratoire Charles Coulomb (L2C), Univ. Montpellier, CNRS, Montpellier, France

  ⨯
• Jérôme Dorignac,

  Roles Conceptualization, Writing – original draft

  Affiliation Laboratoire Charles Coulomb (L2C), Univ. Montpellier, CNRS, Montpellier, France

  ⨯
• Yahaya Ibrahim,

  Roles Investigation

  Affiliations Laboratoire Charles Coulomb (L2C), Univ. Montpellier, CNRS, Montpellier, France, Department of Physics, Faculty of Natural and Applied Sciences, Umaru Musa Yar’adua University, Katsina, Nigeria

  https://orcid.org/0000-0001-9848-9075

  ⨯
• Armelle Choquet,

  Roles Investigation

  Affiliation Institut de Génétique Fonctionelle (IGF), Montpellier University, CNRS, Montpellier, France

  ⨯
• Alexandre David,

  Roles Investigation

  Affiliation Institut de Génétique Fonctionelle (IGF), Montpellier University, CNRS, Montpellier, France

  https://orcid.org/0000-0003-3365-1339

  ⨯
• Julie Ripoll,

  Roles Formal analysis

  Affiliation Laboratoire d’Informatique, de Robotique et de Microélectronique de Montpellier (LIRMM), Montpellier University, CNRS, Montpellier, France

  ⨯
• Eric Rivals,

  Roles Formal analysis

  Affiliation Laboratoire d’Informatique, de Robotique et de Microélectronique de Montpellier (LIRMM), Montpellier University, CNRS, Montpellier, France

  ⨯
• Frédéric Geniet,

  Roles Conceptualization

  Affiliation Laboratoire Charles Coulomb (L2C), Univ. Montpellier, CNRS, Montpellier, France

  ⨯
• Nils-Ole Walliser,

  Roles Investigation

  Affiliation Laboratoire Charles Coulomb (L2C), Univ. Montpellier, CNRS, Montpellier, France

  https://orcid.org/0000-0003-3232-1872

  ⨯
• John Palmeri,

  Roles Conceptualization, Writing – original draft

  Affiliation Laboratoire Charles Coulomb (L2C), Univ. Montpellier, CNRS, Montpellier, France

  ⨯
• Andrea Parmeggiani,

  Roles Investigation, Supervision

  Affiliation Laboratoire Charles Coulomb (L2C), Univ. Montpellier, CNRS, Montpellier, France

  https://orcid.org/0000-0003-3025-4266

  ⨯
• Jean-Charles Walter

  Roles Conceptualization, Supervision, Writing – original draft, Writing – review & editing

  * E-mail: jean-charles.walter@umontpellier.fr

  Affiliation Laboratoire Charles Coulomb (L2C), Univ. Montpellier, CNRS, Montpellier, France

  https://orcid.org/0000-0002-7313-0100

  ⨯