A structured evaluation of genome-scale constraint-based modeling tools for microbial consortia

• William T. Scott Jr. ,

  Contributed equally to this work with: William T. Scott Jr., Sara Benito-Vaquerizo

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Software, Supervision, Validation, Visualization, Writing – original draft, Writing – review & editing

  * E-mail: william.scott@wur.nl

  Affiliations Laboratory of Systems and Synthetic Biology, Wageningen University & Research, Wageningen, the Netherlands, UNLOCK, Wageningen University & Research and Delft University of Technology, Wageningen, the Netherlands

  https://orcid.org/0000-0002-4029-2998

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• Sara Benito-Vaquerizo ,

  Contributed equally to this work with: William T. Scott Jr., Sara Benito-Vaquerizo

  Roles Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Validation, Visualization, Writing – original draft, Writing – review & editing

  Affiliation Laboratory of Systems and Synthetic Biology, Wageningen University & Research, Wageningen, the Netherlands

  https://orcid.org/0000-0003-3936-9676

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• Johannes Zimmermann,

  Roles Formal analysis, Software, Writing – review & editing

  Affiliation Christian-Albrechts-University Kiel, Institute of Experimental Medicine, Research Group Medical Systems Biology, Kiel, Germany

  https://orcid.org/0000-0002-5041-1954

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• Djordje Bajić,

  Roles Software, Writing – review & editing

  Affiliation Department of Biotechnology, Delft University of Technology, Delft, the Netherlands

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• Almut Heinken,

  Roles Software, Writing – review & editing

  Affiliation Inserm U1256 Laboratoire nGERE, Université de Lorraine, Nancy, France

  https://orcid.org/0000-0001-6938-8072

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• Maria Suarez-Diez,

  Roles Conceptualization, Funding acquisition, Methodology, Resources, Writing – review & editing

  Affiliation Laboratory of Systems and Synthetic Biology, Wageningen University & Research, Wageningen, the Netherlands

  https://orcid.org/0000-0001-5845-146X

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• Peter J. Schaap

  Roles Conceptualization, Funding acquisition, Resources, Supervision, Writing – review & editing

  Affiliations Laboratory of Systems and Synthetic Biology, Wageningen University & Research, Wageningen, the Netherlands, UNLOCK, Wageningen University & Research and Delft University of Technology, Wageningen, the Netherlands

  https://orcid.org/0000-0002-4346-6084

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